dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00493
Location and strand information: 14904 - 15923 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00494
Location and strand information: 15984 - 16985 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00495
Location and strand information: 17073 - 18152 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrC

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00496
Location and strand information: 18146 - 19705 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import ATP-binding protein LsrA

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00497
Location and strand information: 20114 - 21109 (+)
Family: Crp
Protein type: TF
Protein description: Transcriptional regulator LsrR

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00498
Location and strand information: 21255 - 22835 (+)
Family: null
Protein type: null
Protein description: Autoinducer-2 kinase

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00499
Location and strand information: 23181 - 24428 (+)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 7.2641
Protein molecular weight: 46588.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00500
Location and strand information: 24494 - 25726 (+)
Family: 9.B.67.6.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00501
Location and strand information: 26966 - 28474 (+)
Family: 2.A.3.2.3
Protein type: TC
Protein description: Arginine/ornithine antiporter

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00502
Location and strand information: 28490 - 29773 (+)
Family: null
Protein type: null
Protein description: Arginine deiminase

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00503
Location and strand information: 30408 - 31490 (+)
Family: null
Protein type: null
Protein description: Toluene efflux pump periplasmic linker protein TtgD

Gene clsuter ID: MGYG000002525_2|CGC1
Gene ID: MGYG000002525_00504
Location and strand information: 31490 - 34576 (+)
Family: 2.A.6.2.38
Protein type: TC
Protein description: Cobalt-zinc-cadmium resistance protein CzcA

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002525_00493	Autoinducer 2-binding protein LsrB	TC	14904	15923	-	3.A.1.2.8
MGYG000002525_00494	Autoinducer 2 import system permease protein LsrD	TC	15984	16985	-	3.A.1.2.8
MGYG000002525_00495	Autoinducer 2 import system permease protein LsrC	TC	17073	18152	-	3.A.1.2.8
MGYG000002525_00496	Autoinducer 2 import ATP-binding protein LsrA	TC	18146	19705	-	3.A.1.2.8
MGYG000002525_00497	Transcriptional regulator LsrR	TF	20114	21109	+	Crp
MGYG000002525_00498	Autoinducer-2 kinase	null	21255	22835	+	FGGY_N\| FGGY_C
MGYG000002525_00499	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	23181	24428	+	GT9
MGYG000002525_00500	hypothetical protein	TC	24494	25726	+	9.B.67.6.6
MGYG000002525_00501	Arginine/ornithine antiporter	TC	26966	28474	+	2.A.3.2.3
MGYG000002525_00502	Arginine deiminase	null	28490	29773	+	ADI
MGYG000002525_00503	Toluene efflux pump periplasmic linker protein TtgD	null	30408	31490	+	HlyD_D23
MGYG000002525_00504	Cobalt-zinc-cadmium resistance protein CzcA	TC	31490	34576	+	2.A.6.2.38
Protein ID	Protein Name	Type	Start	End	Strand	Signature